By Joshua HavumakiAs proof of concept applications such as Merrimack’s MM-121 (an ErbB3 inhibitor) slowly make their way into the mainstream, the systems biology community is continuing to grow and people are starting to appreciate the necessity of computational methods to model and explain c...
By Ty ThomsonThere are currently hundreds of online resources for biology, including countless databases containing information on proteins, protein-protein interactions, signaling pathways, and other biological processes. In a recent perspective in Molecular Systems Biology, Bauer-Mehren et al....
By Vy HoangWith recent advances in genetic and functional genomic methods, the field of neuroscience is playing catch up with the other areas of biology that have already adopted these techniques (Geschwind et al.)...
By Isha AntaniIn recent times, systems biology has been “rediscovered”. Systems biology has been around for a while, often referred to by different names. Pa...
By Traci Freed Exciting new functionality, including collaboration tools, has recently been implemented in Cellucidate. Because Cellucidate is web-based there are no updates to install on your computer so login to your account and start exploring these features. If you are not a registered u...
By Isha Antani and Ty ThomsonUnderstanding and interpreting a differential equation model published in a paper can require one to go beyond merely copying and running the model in a simulator...
Cellucidate CelluciFest winners have been announced. Take a look at the winning models. http://www.cellucidate.com/cellucifest
Cellucidate Explore the new immunology content and a special edition of Biorhythms published in Cellucidate. http://www.cellucidate.com/immunology
By Joshua Havumaki and Ty ThomsonMany from Plectix attended the International Conference on Systems Biology (ICSB) last week at Stanford University. In attendance were hundreds of attendees from all over the world. Although the vast majority of participants were academics, the commercial sector w...
By Joshua HavumakiThis summer Plectix had two interns with no prior systems biology experience working in our biology group. Below are their experiences using Cellucidate to recreate mathematical models of cell signaling cascades from the literature...
Cellucidate
Visit our posters:
"Scalable Methods for Modeling Complex Cell Signaling Systems"
Poster 1.107
August 31st, 1:00 - 4:00 PM, Arrillaga Alumni Center, McCaw Hall
"Modeling Complex Systems Implicated in Cancer and Diabetes"
Poster 2.054
September 1st, 1:00 - 5:00 PM, Arrillaga Alumni Center, McCaw Hall
Time:9:00AM Sunday, August 30th
Location:Stanford, CA
By Ty ThomsonGordon and I recently attended the Third Annual q-bio Conference on Cellular Information Processing in Santa Fe, New Mexico...
Cellucidate
A lighthearted look at the future of biological modeling - http://www.youtube.com/watch?v=7jZsEUMeU
Source: www.youtube.com
Why have modeling approaches yet to be embraced in the mainstream of biology, in the way that they have been in other fields such as physics, chemistry and engineering? What would the ideal biological ...
Cellucidate Cellucidate mentioned in a Nature technology feature that discusses the complexity of cellular interactions - http://cellucidate.com/16jul09.html
By Joshua HavumakiAs if we didn’t need another reason to look to computational modeling methods to understand the underlying mechanisms of the cell, a recent article in Molecular Systems Biology by Gitter et al. ...
